STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_03006Probable ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (200 aa)    
Predicted Functional Partners:
PIIN_00452
Probable ribosomal protein S12, cytosolic; Belongs to the universal ribosomal protein uS19 family.
  
 0.999
PIIN_00780
Uncharacterized protein.
   
 0.999
PIIN_00840
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.999
PIIN_00914
Probable RPP0-acidic ribosomal protein L10.e.
   
 0.999
PIIN_00958
Ribosomal_L28e domain-containing protein.
   
 0.999
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
PIIN_01110
Related to 60S ribosomal protein L36-Cryptococcus neoformans.
   
 0.999
PIIN_01235
Probable RPL23A-60S large subunit ribosomal protein L23.e; Belongs to the universal ribosomal protein uL14 family.
  
 0.999
PIIN_01236
Probable 60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
PIIN_01408
Probable ribosomal protein L35.
  
 0.999
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.