STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_03023Related to RAV1-Regulator of (H+)-ATPase in vacuolar membrane. (1326 aa)    
Predicted Functional Partners:
PIIN_05421
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
 
 0.940
PIIN_07023
Probable Vacuolar ATP synthase subunit E.
    
 
 0.874
PIIN_09149
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
 
 0.757
PIIN_11688
WD_REPEATS_REGION domain-containing protein.
   
 
 0.715
PIIN_03601
Probable negative regulator sulfur controller-3; Belongs to the SKP1 family.
    
 
 0.711
PIIN_03604
Probable negative regulator sulfur controller-3; Belongs to the SKP1 family.
    
 
 0.711
PIIN_03606
Related to SKP1-Kinetochore protein complex CBF3, subunit D; Belongs to the SKP1 family.
    
 
 0.711
PIIN_03600
Probable negative regulator sulfur controller-3; Belongs to the SKP1 family.
    
 
 0.711
PIIN_06871
Related to Iron transport protein 1.
 
      0.671
PIIN_06611
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
 
 0.606
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.