STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_03161Uncharacterized protein. (943 aa)    
Predicted Functional Partners:
PIIN_04651
Spindle pole body component.
    
 0.817
PIIN_09005
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.766
PIIN_04568
Probable methylcrotonyl-CoA carboxylase beta chain, mitochondrial.
   
 0.753
PIIN_00983
Uncharacterized protein.
    
 0.733
PIIN_07648
Spindle pole body component.
    
 0.733
PIIN_08495
Spindle pole body component.
    
 0.733
PIIN_01000
Spindle pole body component.
    
 0.723
PIIN_08255
Spindle pole body component.
    
 0.719
PIIN_00784
Nucleoside diphosphate kinase.
    
 0.611
PIIN_02872
NDK domain-containing protein.
    
 0.611
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.