STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_03231Probable QRI8-E2 ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)    
Predicted Functional Partners:
PIIN_07085
Probable UBA1-ubiquitin-protein ligase, E1-like (Ubiquitin-activating) enzyme.
    
 0.972
PIIN_01012
Related to HRD1-involved in degradation of Hmg2p.
    
 
 0.969
PIIN_06153
Probable UBC6-E2 ubiquitin-conjugating enzyme.
    
 0.957
PIIN_05641
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.
    
 
 0.949
PIIN_04742
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
    
   0.944
PIIN_04327
Related to CDC36-transcription factor.
    
 
 0.873
PIIN_06982
CUE domain-containing protein.
    
 
 0.873
PIIN_05436
Probable UBC6-E2 ubiquitin-conjugating enzyme.
   
0.871
PIIN_03333
Related to UBI4-Ubiquitin.
    
 0.870
PIIN_04265
Related to UBI4-Ubiquitin.
    
 0.870
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.