PIIN_03557 protein (Serendipita indica) - STRING interaction network

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

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Score

PIIN_03557

Related to RRP9-protein associated with the U3 small nucleolar RNA. (560 aa)

Predicted Functional Partners:

PIIN_01336

0.999

PIIN_02255

0.999

PIIN_05181

0.999

PIIN_05939

0.999

PIIN_08145

0.999

PIIN_01213

0.998

PIIN_03751

0.998

PIIN_05178

0.998

PIIN_07907

0.998

PIIN_00160

0.997

Your Current Organism:

Serendipita indica

NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PIIN_00160	PIIN_01213	G4T5A5	G4T7W1	BP28CT domain-containing protein.	U3 small nucleolar RNA-associated protein 22.	0.999
PIIN_00160	PIIN_01336	G4T5A5	G4T888	BP28CT domain-containing protein.	Probable NOP1-fibrillarin.	0.996
PIIN_00160	PIIN_02255	G4T5A5	G4TAN1	BP28CT domain-containing protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.991
PIIN_00160	PIIN_03557	G4T5A5	G4TE88	BP28CT domain-containing protein.	Related to RRP9-protein associated with the U3 small nucleolar RNA.	0.997
PIIN_00160	PIIN_03751	G4T5A5	G4TES0	BP28CT domain-containing protein.	Uncharacterized protein.	0.999
PIIN_00160	PIIN_05178	G4T5A5	G4TIU5	BP28CT domain-containing protein.	Related to ENP1-required for pre-rRNA processing and 40S ribosomal subunit synthesis.	0.993
PIIN_00160	PIIN_05181	G4T5A5	G4TIV1	BP28CT domain-containing protein.	Probable NOP58-required for pre-18S rRNA processing.	0.999
PIIN_00160	PIIN_05939	G4T5A5	G4TL11	BP28CT domain-containing protein.	Related to UTP4-U3 snoRNP protein.	0.999
PIIN_00160	PIIN_07907	G4T5A5	G4TRL0	BP28CT domain-containing protein.	Related to Pwp2p.	0.999
PIIN_00160	PIIN_08145	G4T5A5	G4TS99	BP28CT domain-containing protein.	Probable SIK1-involved in pre-rRNA processing.	0.997
PIIN_01213	PIIN_00160	G4T7W1	G4T5A5	U3 small nucleolar RNA-associated protein 22.	BP28CT domain-containing protein.	0.999
PIIN_01213	PIIN_01336	G4T7W1	G4T888	U3 small nucleolar RNA-associated protein 22.	Probable NOP1-fibrillarin.	0.998
PIIN_01213	PIIN_02255	G4T7W1	G4TAN1	U3 small nucleolar RNA-associated protein 22.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.983
PIIN_01213	PIIN_03557	G4T7W1	G4TE88	U3 small nucleolar RNA-associated protein 22.	Related to RRP9-protein associated with the U3 small nucleolar RNA.	0.998
PIIN_01213	PIIN_03751	G4T7W1	G4TES0	U3 small nucleolar RNA-associated protein 22.	Uncharacterized protein.	0.999
PIIN_01213	PIIN_05178	G4T7W1	G4TIU5	U3 small nucleolar RNA-associated protein 22.	Related to ENP1-required for pre-rRNA processing and 40S ribosomal subunit synthesis.	0.997
PIIN_01213	PIIN_05181	G4T7W1	G4TIV1	U3 small nucleolar RNA-associated protein 22.	Probable NOP58-required for pre-18S rRNA processing.	0.996
PIIN_01213	PIIN_05939	G4T7W1	G4TL11	U3 small nucleolar RNA-associated protein 22.	Related to UTP4-U3 snoRNP protein.	0.999
PIIN_01213	PIIN_07907	G4T7W1	G4TRL0	U3 small nucleolar RNA-associated protein 22.	Related to Pwp2p.	0.994
PIIN_01213	PIIN_08145	G4T7W1	G4TS99	U3 small nucleolar RNA-associated protein 22.	Probable SIK1-involved in pre-rRNA processing.	0.994

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Network Stats

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Functional enrichments in your networkNote: some enrichments may be expected here (why?)
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Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006814

Sodium ion transport

6 of 14

2.06

3.51

2.20e-08

GO:0022900

Electron transport chain

5 of 93

1.16

0.93

0.0021

GO:0006810

Transport

8 of 318

0.83

0.7

0.00071

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016655

Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor

6 of 32

1.7

2.39

1.21e-06

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005886

Plasma membrane

8 of 480

0.65

0.47

0.0067

GO:0016021

Integral component of membrane

8 of 672

0.51

0.34

0.0262

GO:0016020

Membrane

9 of 938

0.41

0.29

0.0262

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:3218

Translocase, and ApbE family

11 of 27

2.04

6.69

2.14e-19

CL:3256

Sodium transport

6 of 6

2.43

4.97

1.03e-10

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0739

Sodium transport

6 of 8

2.3

4.67

2.10e-10

KW-0830

Ubiquinone

6 of 19

1.93

3.52

4.67e-09

KW-1278

Translocase

8 of 45

1.68

3.25

2.10e-10

KW-0285

Flavoprotein

6 of 35

1.66

2.62

9.27e-08

KW-0520

NAD

6 of 44

1.56

2.34

2.02e-07

(more ...)

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF03116

NQR2, RnfD, RnfE family

3 of 3

2.43

1.83

0.00038

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR004338

Ion-translocating oxidoreductase NqrB/RnfD

3 of 3

2.43

1.62

0.0010

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