STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_03601Probable negative regulator sulfur controller-3; Belongs to the SKP1 family. (150 aa)    
Predicted Functional Partners:
PIIN_05007
Related to JHD1-JmjC domain family histone demethylase specific for H3-K36.
   
 0.999
PIIN_09173
Probable ring-box protein 1.
   
 0.937
PIIN_01998
Related to GRR1-required for glucose repression and for glucose and cation transport.
   
 0.930
PIIN_00317
Related to cell division control protein CDC4.
    
 0.927
PIIN_02257
Related to F-box/WD-repeat protein.
    
 0.924
PIIN_01643
Probable SCF complex member Cullin 1; Belongs to the cullin family.
   
 0.918
PIIN_05095
Related to F-box protein pof7.
    
 0.918
PIIN_00768
Related to MET30-involved in regulation of sulfur assimilation genes and cell cycle progression.
    
 0.914
PIIN_04388
F-box domain-containing protein.
    
 0.884
PIIN_07349
Uncharacterized protein.
    
 0.878
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.