STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_03691Uncharacterized protein. (207 aa)    
Predicted Functional Partners:
PIIN_01774
Protein kinase domain-containing protein.
    
 0.864
PIIN_03689
Small nuclear ribonucleoprotein Sm D2.
    
 0.856
PIIN_02523
Small nuclear ribonucleoprotein Sm D3.
    
 0.854
PIIN_03422
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.852
PIIN_04296
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.844
PIIN_01075
Sm domain-containing protein.
    
 0.842
PIIN_01763
Uncharacterized protein.
   
 0.841
PIIN_06177
Related to translation elongation factor eEF1, gamma chain.
    
 0.839
PIIN_00432
Related to small nuclear ribonucleoprotein snRNP U1A.
    
 0.836
PIIN_05257
Related to small nuclear ribonucleoprotein U2B` (U2 small nuclear RNA-associated protein B`).
    
 0.836
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.