PIIN_03682 protein (Serendipita indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PIIN_03682

Uncharacterized protein. (409 aa)

Predicted Functional Partners:

PIIN_08203

0.907

PIIN_04531

0.844

PIIN_05024

0.844

PIIN_mito_NAD4

0.844

PIIN_mit_NAD2

0.844

G4U3F7_SERID

0.844

PIIN_mito_NAD5

0.844

PIIN_03412

0.793

PIIN_00218

0.788

PIIN_08844

0.788

Your Current Organism:

Serendipita indica

NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4U3F7_SERID	PIIN_00218	G4U3F7	G4T5E0	NADH:ubiquinone oxidoreductase subunit 4L.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.974
G4U3F7_SERID	PIIN_03412	G4U3F7	G4U2G8	NADH:ubiquinone oxidoreductase subunit 4L.	Probable NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial.	0.984
G4U3F7_SERID	PIIN_03682	G4U3F7	G4TEL5	NADH:ubiquinone oxidoreductase subunit 4L.	Uncharacterized protein.	0.844
G4U3F7_SERID	PIIN_04531	G4U3F7	G4TH01	NADH:ubiquinone oxidoreductase subunit 4L.	Related to SAL1-member of the Ca2+-binding subfamily of the mitochondrial carrier family; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.990
G4U3F7_SERID	PIIN_05024	G4U3F7	G4TIC3	NADH:ubiquinone oxidoreductase subunit 4L.	Uncharacterized protein.	0.638
G4U3F7_SERID	PIIN_08203	G4U3F7	G4TSF7	NADH:ubiquinone oxidoreductase subunit 4L.	Uncharacterized protein.	0.971
G4U3F7_SERID	PIIN_08844	G4U3F7	G4TU81	NADH:ubiquinone oxidoreductase subunit 4L.	Probable NADH dehydrogenase (Ubiquinone) 78K chain.	0.992
G4U3F7_SERID	PIIN_mit_NAD2	G4U3F7	G4U3E4	NADH:ubiquinone oxidoreductase subunit 4L.	NADH-ubiquinone oxidoreductase chain 2.	0.987
G4U3F7_SERID	PIIN_mito_NAD4	G4U3F7	G4U3E3	NADH:ubiquinone oxidoreductase subunit 4L.	NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.995
G4U3F7_SERID	PIIN_mito_NAD5	G4U3F7	G4U3F8	NADH:ubiquinone oxidoreductase subunit 4L.	NADH-ubiquinone oxidoreductase chain 5; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.988
PIIN_00218	G4U3F7_SERID	G4T5E0	G4U3F7	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH:ubiquinone oxidoreductase subunit 4L.	0.974
PIIN_00218	PIIN_03412	G4T5E0	G4U2G8	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Probable NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial.	0.999
PIIN_00218	PIIN_03682	G4T5E0	G4TEL5	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.788
PIIN_00218	PIIN_04531	G4T5E0	G4TH01	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Related to SAL1-member of the Ca2+-binding subfamily of the mitochondrial carrier family; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.955
PIIN_00218	PIIN_05024	G4T5E0	G4TIC3	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.721
PIIN_00218	PIIN_08203	G4T5E0	G4TSF7	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.999
PIIN_00218	PIIN_08844	G4T5E0	G4TU81	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Probable NADH dehydrogenase (Ubiquinone) 78K chain.	0.999
PIIN_00218	PIIN_mit_NAD2	G4T5E0	G4U3E4	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase chain 2.	0.995
PIIN_00218	PIIN_mito_NAD4	G4T5E0	G4U3E3	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.995
PIIN_00218	PIIN_mito_NAD5	G4T5E0	G4U3F8	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase chain 5; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.995