STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_03717Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. (580 aa)    
Predicted Functional Partners:
PIIN_01748
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
   
 0.996
PIIN_00456
Uncharacterized protein.
   
 0.985
PIIN_01111
Related to ELP2-29 kDa subunit of elongator and elongating RNA polymerase II holoenzyme.
   
 
 0.983
PIIN_02021
Related to rasp f 7 allergen.
   
 0.972
PIIN_01432
Related to KTI12-Elongator associated protein.
   
 
 0.924
PIIN_07705
Uncharacterized protein.
   
 0.898
PIIN_00697
Related to expansin family protein-Laccaria bicolor.
   
 0.898
PIIN_02981
DPH-type MB domain-containing protein.
   
 
 0.848
PIIN_02201
Related to putative histone acetylase.
    
 
 0.799
PIIN_04295
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
  
 0.778
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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