STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_03822Related to ERP2-p24 protein involved in membrane trafficking. (214 aa)    
Predicted Functional Partners:
PIIN_08017
Related to EMP24 protein.
   
0.985
PIIN_01129
Related to ERV25-component of the COPII-coated vesicles.
   
 0.984
PIIN_00077
Uncharacterized protein.
   
 0.983
PIIN_02085
Related to p24 protein, involved in membrane trafficking.
   
 0.973
PIIN_02776
Related to MRPL17-mitochondrial ribosomal protein, large subunit.
   
 
 0.942
PIIN_06986
Related to ribosomal protein S4, mitochondrial.
   
 
 0.941
PIIN_07126
MRP-S28 domain-containing protein.
   
 
 0.939
PIIN_07365
Uncharacterized protein.
   
 
 0.939
PIIN_02994
Uncharacterized protein.
   
 
 0.938
PIIN_01134
Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.937
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.