STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_03932Probable dCMP deaminase. (281 aa)    
Predicted Functional Partners:
PIIN_06144
Related to thymidylate kinase.
    
 0.916
PIIN_09361
Related to SIS2 protein (Cycle-specific gene control).
  
 
 0.912
PIIN_06098
Related to thymidylate synthase.
  
 
 0.907
PIIN_09066
Probable dUTP pyrophosphatase.
  
 0.902
PIIN_09431
Related to Purine-nucleoside phosphorylase.
     
 0.858
PIIN_04362
AB hydrolase-1 domain-containing protein.
  
 
  0.840
PIIN_05686
Related to epoxide hydrolase.
  
 
  0.840
PIIN_07203
Uncharacterized protein.
  
 0.827
PIIN_04156
Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
   
 0.807
PIIN_01800
Related to 5`-nucleotidase; Belongs to the 5'-nucleotidase family.
  
 
  0.799
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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