STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_03954Uncharacterized protein. (168 aa)    
Predicted Functional Partners:
PIIN_09361
Related to SIS2 protein (Cycle-specific gene control).
   
 0.906
PIIN_02718
Related to ELP2-29 kDa subunit of elongator and elongating RNA polymerase II holoenzyme.
    
 0.883
PIIN_00144
Uncharacterized protein.
     
 0.789
PIIN_01118
ACPS domain-containing protein.
     
 0.789
PIIN_08551
DFP domain-containing protein.
  
 0.758
PIIN_03729
Related to pantothenate kinase.
    
 0.632
PIIN_05036
Uncharacterized protein.
   
 0.594
PIIN_09102
Probable adenylosuccinate lyase.
    
  0.567
PIIN_06331
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
    
  0.564
PIIN_02676
Related to formamidopyrimidine-DNA glycosylase.
  
  
 0.548
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.