STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_03989L51_S25_CI-B8 domain-containing protein. (174 aa)    
Predicted Functional Partners:
PIIN_01877
Uncharacterized protein.
   
 
 0.992
PIIN_03417
Related to MRP4-Mitochondrial ribosomal protein, small subunit.
   
 
 0.992
PIIN_02776
Related to MRPL17-mitochondrial ribosomal protein, large subunit.
   
 
 0.991
PIIN_05921
Related to 30S ribosomal protein S16.
   
 
 0.991
PIIN_06475
Ribosomal_S10 domain-containing protein.
   
 
 0.989
PIIN_08607
Related to MRPL3-Mitochondrial ribosomal protein, large subunit.
   
 
 0.989
PIIN_01364
Related to MRPS28-mitochondrial ribosomal protein, small subunit.
   
 
 0.988
PIIN_09819
Probable MRPL23-mitochondrial ribosomal protein, large subunit; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.988
PIIN_01974
Related to 50S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.987
PIIN_01766
Related to mitochondrial ribosomal protein YmL8; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.987
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.