STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_11782Related to acetyl-CoA carboxylase. (1041 aa)    
Predicted Functional Partners:
PIIN_04044
Probable acetyl-CoA carboxylase.
 
     0.927
PIIN_11622
Related to acetyl-CoA carboxylase.
 
     0.919
PIIN_00313
Related to fatty acid synthase, beta and alpha chains.
   
 0.851
PIIN_04568
Probable methylcrotonyl-CoA carboxylase beta chain, mitochondrial.
  
 0.835
PIIN_03937
Probable methylcrotonoyl-CoA carboxylase biotin carboxylase chain.
 
 
0.829
PIIN_04870
Related to BPL1-biotin holocarboxylase synthetase.
  
 0.808
PIIN_04966
Probable ATP citrate lyase subunit 1.
   
 
 0.794
PIIN_03574
Acetyl-coenzyme A synthetase.
  
 0.771
PIIN_05313
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
0.748
PIIN_04164
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
   
 
  0.737
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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