STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04085DUF2431 domain-containing protein. (282 aa)    
Predicted Functional Partners:
PIIN_03135
Probable NOP2-nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.580
PIIN_02366
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
      
 0.568
PIIN_04245
Fcf2 domain-containing protein.
   
  
 0.534
PIIN_02794
Uncharacterized protein.
   
 
  0.522
PIIN_04905
Uncharacterized protein.
   
 
  0.522
PIIN_07472
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
   
 
  0.522
PIIN_04149
Related to protein RPF2 involved in ribosomal large subunit assembly and maintenance.
   
    0.515
PIIN_02751
TPR_REGION domain-containing protein.
   
    0.512
PIIN_01330
Related to RLP24-Ribosomal Like Protein 24, part of a pre-60S complex.
   
   0.503
PIIN_01117
Uncharacterized protein.
   
  
 0.470
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.