STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04105DRMBL domain-containing protein. (741 aa)    
Predicted Functional Partners:
PIIN_09549
Related to ATP-dependent DNA helicase II, 80 kDa subunit.
    
 0.970
PIIN_05840
Related to ATP-dependent DNA helicase II, 70 kDa subunit.
   
 0.963
PIIN_00345
Related to cleavage and polyadenylation specificity factor, 160 kDa subunit.
   
 0.919
PIIN_06612
Related to Symplekin.
   
 0.907
PIIN_00990
Fip1 domain-containing protein.
    
 0.879
PIIN_01306
DNA ligase.
   
 0.878
PIIN_04103
Related to probable RNA helicase MPH1.
   
 0.872
PIIN_05048
Probable SSU72-Nuclear zinc-finger motif containing protein.
   
 0.869
PIIN_04421
Related to PCF11 component of pre-mRNA 3`-end processing factor CF I.
    
 0.867
PIIN_02665
Related to poly(A) polymerase.
    
 0.851
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.