STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04175Uncharacterized protein. (600 aa)    
Predicted Functional Partners:
PIIN_04582
PAS domain-containing protein.
    
 0.851
PIIN_08559
BHLH domain-containing protein.
    
 0.851
PIIN_01479
Uncharacterized protein.
    
 0.782
PIIN_05679
Probable stress-induced protein STI1.
    
 0.782
PIIN_03724
Related to Pre-mRNA-splicing factor RBM22.
   
 0.778
PIIN_04422
Probable RPL9A-ribosomal protein L9.e.
    
 0.763
PIIN_02219
Related to HSP80 heat shock protein 80.
   
 0.762
PIIN_03300
Uncharacterized protein.
   
 0.762
PIIN_03486
Flavin_Reduct domain-containing protein.
   
 0.762
PIIN_04212
Uncharacterized protein.
    
 0.740
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.