STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04363FAS1 domain-containing protein. (203 aa)    
Predicted Functional Partners:
PIIN_04087
Probable Chromatin assembly factor 1 subunit c.
   
 0.946
PIIN_03371
PHD-type domain-containing protein.
   
 
 0.923
PIIN_02683
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.918
PIIN_06656
Related to histone deacetylase.
   
 0.918
PIIN_03646
Uncharacterized protein.
    
 0.916
PIIN_04906
Related to Chromo domain protein MRG15.
   
 0.909
PIIN_09071
SANT domain-containing protein.
   
 0.904
PIIN_03470
Related to histone deacetylase.
   
 0.868
PIIN_04004
Probable HOS2-putative histone deacetylase.
   
 0.868
PIIN_04338
Related to HOS3-Trichostatin A-insensitive homodimeric histone deacetylase (HDAC).
    
 0.825
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.