STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04392Beta-galactosidase. (1032 aa)    
Predicted Functional Partners:
PIIN_00485
Related to beta-1,6-glucanase; Belongs to the glycosyl hydrolase 30 family.
  
 0.740
PIIN_04237
Uncharacterized protein.
  
 
 0.687
PIIN_06716
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.671
PIIN_06733
Uncharacterized protein.
   
 0.671
PIIN_07381
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.671
PIIN_07657
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.671
PIIN_03577
Probable beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.654
PIIN_04933
Uncharacterized protein.
   
 0.648
PIIN_04767
Beta-hexosaminidase.
  
 
 0.633
PIIN_00180
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     
 0.609
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.