STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04405Uncharacterized protein. (825 aa)    
Predicted Functional Partners:
PIIN_01788
VASt domain-containing protein.
   
 0.828
PIIN_00553
Uncharacterized protein.
   
 0.790
PIIN_05132
Probable Calmodulin; Belongs to the calmodulin family.
    
 0.726
PIIN_05133
Probable Calmodulin; Belongs to the calmodulin family.
    
 0.726
PIIN_06198
Probable Myosin regulatory light chain cdc4.
    
 0.726
PIIN_07651
Probable Calmodulin; Belongs to the calmodulin family.
    
 0.726
PIIN_05687
Probable CNB1-calcineurin B, regulatory subunit.
    
 0.634
PIIN_05830
Probable SDS22-protein phosphatase 1, regulatory subunit 7.
    
 0.614
PIIN_07266
Uncharacterized protein.
    
 0.614
PIIN_00551
Related to Myosin regulatory light chain 2-A, smooth muscle isoform.
    
 0.596
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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