STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04414Related to membrane glycoprotein spo14, putative-Cryptococcus neoformans. (381 aa)    
Predicted Functional Partners:
PIIN_02760
Probable GTP-binding protein SAR1; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.998
PIIN_08699
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.885
PIIN_05930
Probable SEC24-COPII coated vesicle component.
   
 
 0.842
PIIN_01124
Related to Protein transport protein Sec24C.
   
 0.806
PIIN_08518
Probable syntaxin, vesicular transport protein.
   
 
 0.777
PIIN_01169
Related to Het-c heterokaryon incompatibility protein.
   
 0.770
PIIN_02516
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
     
 0.765
PIIN_01129
Related to ERV25-component of the COPII-coated vesicles.
    
 0.733
PIIN_08017
Related to EMP24 protein.
     
 0.720
PIIN_00764
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 
 0.695
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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