STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04447Related to importin beta-2 subunit (Transportin). (556 aa)    
Predicted Functional Partners:
PIIN_04914
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.946
PIIN_04446
Related to importin beta-2 subunit (Transportin).
 
     0.944
PIIN_02561
Uncharacterized protein.
    
 
 0.832
PIIN_07698
Probable heterogeneous nuclear ribonucleoprotein HRP1.
    
 
 0.806
PIIN_01244
Related to KAP123-Importin beta-4 subunit.
   
 
0.804
PIIN_05355
Peptidase S59 domain-containing protein.
   
 0.769
PIIN_05131
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.690
PIIN_02785
RNase_PH domain-containing protein.
   
 
  0.658
PIIN_04875
Related to Exosome complex exonuclease RRP43.
   
 
  0.658
PIIN_01674
Related to CSL4-exosome core component.
   
 
  0.655
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.