STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04459Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. (174 aa)    
Predicted Functional Partners:
PIIN_00892
Related to SDH3-cytochrome b560 subunit of respiratory complex II.
   
 0.999
PIIN_05897
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 0.999
PIIN_01614
Probable SDH1-succinate dehydrogenase (Ubiquinone) flavoprotein, mitochondrial.
   
 0.996
PIIN_11781
Probable SDH1-succinate dehydrogenase (Ubiquinone) flavoprotein, mitochondrial.
   
 0.996
PIIN_08679
Probable OSM1-fumarate reductase.
   
 0.973
PIIN_09560
Probable nadh-ubiquinone oxidoreductase 10.5 kDa subunit.
   
  
 0.961
PIIN_09498
Probable QCR2-40 kDa ubiquinol cytochrome-c reductase core protein 2.
   
 0.960
PIIN_02014
Probable NADH-ubiquinone oxidoreductase 23 kDa subunit.
   
  
 0.957
PIIN_08203
Uncharacterized protein.
   
  
 0.956
PIIN_01683
Probable FUM1-fumarate hydratase.
   
 0.951
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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