STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04595Related to Peripheral-type benzodiazepine receptor. (183 aa)    
Predicted Functional Partners:
PIIN_06466
Probable mitochondrial porin.
   
 0.730
PIIN_03036
Probable ADP, ATP carrier protein (ADP/ATP translocase); Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.697
PIIN_04431
Related to deoxyribodipyrimidine photo-lyase PHR.
  
  
 0.566
PIIN_03527
Uncharacterized protein.
      
 0.503
PIIN_00495
Uncharacterized protein.
      
 0.503
PIIN_09407
Helicase C-terminal domain-containing protein.
   
 
 0.465
PIIN_10598
Helicase ATP-binding domain-containing protein.
   
 
 0.465
PIIN_06217
Uncharacterized protein.
   
    0.438
PIIN_08133
Related to 40S ribosomal protein S18-Coprinopsis cinerea.
   
    0.438
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.