STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04600Uncharacterized protein. (889 aa)    
Predicted Functional Partners:
PIIN_09773
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.908
PIIN_01810
Probable RPN7-subunit of the regulatory particle of the proteasome.
   
 0.898
PIIN_07375
Probable 26S proteasome regulatory subunit Rpn10.
   
 0.892
PIIN_11768
Probable 26s proteasome p44.5 protein.
   
 0.882
PIIN_05150
Probable 26S proteasome non-ATPase regulatory subunit p58.
   
 0.882
PIIN_05232
Related to 26S proteasome regulatory particle chain RPN9.
   
 0.882
PIIN_05762
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.882
PIIN_02050
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.880
PIIN_02666
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
 0.874
PIIN_03812
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.874
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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