STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04611PAM2 domain-containing protein. (336 aa)    
Predicted Functional Partners:
PIIN_02797
Related to nuclear matrix protein p84.
    
 0.999
PIIN_11853
Uncharacterized protein.
   
 0.999
PIIN_09307
Related to THO complex subunit 3.
   
 0.999
PIIN_07667
Probable SUB2-mRNA export protein, member of the DEAD-box RNA helicase superfamily.
   
 0.933
PIIN_07669
Probable SUB2-mRNA export protein, member of the DEAD-box RNA helicase superfamily.
   
 0.933
PIIN_01140
RRM domain-containing protein.
   
 0.858
PIIN_07129
Related to YRA1-RNA annealing protein.
   
 0.858
PIIN_07685
RRM domain-containing protein.
   
 0.858
PIIN_02383
Uncharacterized protein.
   
 0.854
PIIN_06473
Uncharacterized protein.
   
 
 0.832
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.