STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04604Probable G10 protein. (89 aa)    
Predicted Functional Partners:
PIIN_01277
Probable protein CCN1-putative cell cycle control protein.
    
 0.999
PIIN_03724
Related to Pre-mRNA-splicing factor RBM22.
   
 0.999
PIIN_04895
Probable puff-specific nuclear protein Bx42.
    
 0.999
PIIN_08978
Related to pre-mRNA splicing factor.
   
 0.999
PIIN_09082
Related to SYF1-synthetic lethal with CDC40.
    
 0.999
PIIN_06740
RRM domain-containing protein.
   
 0.997
PIIN_02209
Probable pleiotropic regulator 1 (PLRG1).
   
 
 0.990
PIIN_06795
Uncharacterized protein.
   
 
 0.990
PIIN_07565
Probable Pre-mRNA splicing factor cwc22.
   
 
 0.990
PIIN_08095
Probable ribosomal elongation factor EF-2.
   
 
 0.989
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.