STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04833Uncharacterized protein. (970 aa)    
Predicted Functional Partners:
PIIN_04103
Related to probable RNA helicase MPH1.
    
 0.955
PIIN_05487
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.580
PIIN_00629
Related to nuclear transport factor.
    
 0.557
PIIN_07203
Uncharacterized protein.
   
 0.557
PIIN_09066
Probable dUTP pyrophosphatase.
   
 0.557
PIIN_04212
Uncharacterized protein.
    
 0.547
PIIN_07580
Uncharacterized protein.
   
 0.536
PIIN_04853
Probable NPL4-nuclear protein localization factor and ER translocation component.
    
 0.529
PIIN_08830
Related to RFA2-DNA replication factor A, 36 kDa subunit.
    
  0.525
PIIN_05582
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.507
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.