STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04845Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. (503 aa)    
Predicted Functional Partners:
PIIN_05910
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
   
 0.999
PIIN_04109
ATG16 domain-containing protein.
   
 0.998
PIIN_02489
Autophagy-related protein 3.
   
 0.993
PIIN_02832
Related to ATG18-Phosphatidylinositol 3,5-bisphosphate-binding protein.
    
 0.963
PIIN_04148
Autophagy-related protein.
   
 0.957
PIIN_07726
Related to APG7 (Component of the autophagic system).
    
 0.931
PIIN_03591
Related to Lipase, required for intravacuolar lysis of autophagic bodies.
   
 
 0.929
PIIN_04005
Related to Lipase, required for intravacuolar lysis of autophagic bodies.
   
 
 0.929
PIIN_09817
DUF3543 domain-containing protein.
    
 
 0.880
PIIN_09972
Related to APG1-essential for autophagocytosis; Belongs to the protein kinase superfamily.
    
 
 0.880
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.