STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04886Uncharacterized protein. (665 aa)    
Predicted Functional Partners:
PIIN_01774
Protein kinase domain-containing protein.
    
 0.752
PIIN_04572
Uncharacterized protein.
   
 0.615
PIIN_00217
Probable BMH1-14-3-3 protein epsilon; Belongs to the 14-3-3 family.
   
 0.527
PIIN_01256
Uncharacterized protein.
    
 0.522
PIIN_03628
Uncharacterized protein.
    
 0.522
PIIN_02179
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.520
PIIN_02748
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.520
PIIN_08067
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.520
PIIN_00882
Related to mRNA export factor mex67.
    
 0.515
PIIN_04895
Probable puff-specific nuclear protein Bx42.
    
  0.501
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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