STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04924Related to TAF6-Subunit (60 kDa) of TFIID and SAGA complexes. (525 aa)    
Predicted Functional Partners:
PIIN_00150
Uncharacterized protein.
    
 0.999
PIIN_00383
TAFII28 domain-containing protein.
    
 0.999
PIIN_00750
Probable TATA-box-binding factor TBP.
   
 0.999
PIIN_01792
Related to TAF2-component of TFIID complex.
    
 0.999
PIIN_02419
Related to TAF1-TFIID subunit (TBP-associated factor), 145 kD.
    
 0.999
PIIN_02648
Uncharacterized protein.
    
 0.999
PIIN_03509
TFIID_20kDa domain-containing protein.
   
 0.999
PIIN_03711
Related to TAF7-TFIID subunit (TBP-associated factor), 67 kD.
    
 0.999
PIIN_04655
TAF4 domain-containing protein.
    
 0.999
PIIN_06739
Uncharacterized protein.
    
 0.999
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.