STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_05008Related to VPS55-protein involved in late endosome to vacuole trafficking. (129 aa)    
Predicted Functional Partners:
PIIN_05880
Uncharacterized protein.
   
 
 0.868
PIIN_09684
Related to VPS68-Protein involved in vacuolar protein sorting.
   
 
 0.868
PIIN_09894
Uncharacterized protein.
   
 
 0.868
PIIN_10012
Uncharacterized protein.
   
 
 0.868
PIIN_03693
Related to KIP1-kinesin-related protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
 
      0.525
PIIN_08496
Related to TSD2 protein, required for DNA replication.
 
      0.451
PIIN_01812
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 
 0.405
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.