STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_05136Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family. (606 aa)    
Predicted Functional Partners:
PIIN_01656
Related to AOS1 protein.
   
 0.999
PIIN_00573
Probable ubiquitin--protein ligase hus5; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.996
PIIN_05529
WLM domain-containing protein.
    
 0.973
PIIN_07181
Ubiquitin-like domain-containing protein.
   
 0.961
PIIN_07728
Related to SMT3 ubiquitin-like protein.
   
 0.961
PIIN_07217
Uncharacterized protein.
   
 0.949
PIIN_07621
Probable Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.904
PIIN_04148
Autophagy-related protein.
   
 0.874
PIIN_02489
Autophagy-related protein 3.
    
 0.870
PIIN_05910
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
    
 0.841
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.