STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_05164Related to metal homeostasis protein. (461 aa)    
Predicted Functional Partners:
PIIN_03760
E3 ubiquitin-protein ligase.
    
 
 0.584
PIIN_04483
E3 ubiquitin-protein ligase.
    
 
 0.584
PIIN_04493
E3 ubiquitin-protein ligase.
    
 
 0.584
PIIN_01709
TFIIIC_delta domain-containing protein.
    
 
 0.580
PIIN_00299
SH3 domain-containing protein.
    
 
 0.575
PIIN_01811
C2 domain-containing protein.
    
 
 0.575
PIIN_05617
Related to BOI1-BEM1 protein-binding protein.
    
 
 0.575
PIIN_08925
Uncharacterized protein.
    
 
 0.575
PIIN_07554
Related to rat ubiquitin ligase Nedd4.
      
 0.547
PIIN_01481
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
   0.513
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.