STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_05229Uncharacterized protein. (1175 aa)    
Predicted Functional Partners:
PIIN_02378
Probable YEF3-translation elongation factor eEF3.
   
   0.993
PIIN_00972
Probable mrna export factor elf1.
   
   0.991
PIIN_00452
Probable ribosomal protein S12, cytosolic; Belongs to the universal ribosomal protein uS19 family.
  
 0.989
PIIN_03011
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.989
PIIN_03638
Probable 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.989
PIIN_04268
Probable RPS19B-ribosomal protein S19.e, cytosolic.
   
 0.989
PIIN_06139
Probable 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.989
PIIN_08861
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.989
PIIN_03435
Probable RPS17B-ribosomal protein S17.e.B.
   
 0.989
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.988
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.