STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_05244Related to carbamoyl-phosphate synthase small chain, arginine-specific, small chain, mitochondrial. (432 aa)    
Predicted Functional Partners:
PIIN_02560
Probable arginine-specific carbamoyl-phosphate synthetase, ammonia chain.
 
 0.998
PIIN_07432
Probable ARG6-n-acetyl-gamma-glutamyl-phosphate reductase; In the N-terminal section; belongs to the acetylglutamate kinase family.
  
 
 0.969
PIIN_02824
Probable ARG1-argininosuccinate synthetase.
  
 
 0.967
PIIN_02311
Amidophosphoribosyltransferase.
  
 
 0.935
PIIN_05483
Probable URA2-multifunctional pyrimidine biosynthesis protein.
  
0.925
PIIN_03839
Probable ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 0.916
PIIN_00797
Related to DAL1-Allantoinase.
  
 0.903
PIIN_03931
Amidohydro-rel domain-containing protein.
  
 0.903
PIIN_02483
Related to dihydroorotate dehydrogenase a.
  
 0.896
PIIN_03245
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.896
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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