STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_05694Related to SMP2 protein, involved in plasmid maintenance, respiration and cell proliferation. (1133 aa)    
Predicted Functional Partners:
PIIN_05724
Related to nuclear envelope protein NEM1.
    
 0.970
PIIN_01231
Related to HSD1-ER membrane protein.
    
 0.946
PIIN_04050
Probable diacylglycerol acyltransferase type 2b.
    
 0.921
PIIN_05802
O-acyltransferase.
    
 0.914
PIIN_02372
annotation not available
    
 0.902
PIIN_09566
Related to SCT1-glycerol 3-phosphate/dihydroxyacetone phosphate dual substrate acyltransferase.
    
 0.892
PIIN_02175
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
     
 0.889
PIIN_01665
Related to acetyltransferase.
     
 0.878
PIIN_07544
Related to glycerol-3-phosphate-acyltransferase-Laccaria bicolor.
    
 0.874
PIIN_04173
Uncharacterized protein.
   
 
 0.866
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.