STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_05760Related to MRPL16-mitochondrial ribosomal protein, large subunit; Belongs to the universal ribosomal protein uL16 family. (223 aa)    
Predicted Functional Partners:
PIIN_09819
Probable MRPL23-mitochondrial ribosomal protein, large subunit; Belongs to the universal ribosomal protein uL13 family.
  
 0.992
PIIN_05350
Related to MRPL9-mitochondrial ribosomal protein, large subunit; Belongs to the universal ribosomal protein uL3 family.
  
 0.991
PIIN_00972
Probable mrna export factor elf1.
   
 
 0.990
PIIN_02378
Probable YEF3-translation elongation factor eEF3.
   
 
 0.990
PIIN_04154
Related to MRPL10-mitochondrial ribosomal protein, large subunit.
  
 0.990
PIIN_01766
Related to mitochondrial ribosomal protein YmL8; Belongs to the bacterial ribosomal protein bL17 family.
  
 0.990
PIIN_07475
Related to MRPL6-mitochondrial ribosomal protein, large subunit.
 
 0.989
PIIN_01974
Related to 50S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
  
 0.988
PIIN_01827
Uncharacterized protein.
   
 0.987
PIIN_03494
Related to mitochondrial ribosomal protein L2 of the large subunit.
 
 0.987
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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