STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_05796MACPF domain-containing protein. (668 aa)    
Predicted Functional Partners:
PIIN_05583
Probable AGX1-alanine-glyoxylate transaminase.
   
 0.760
PIIN_00314
Probable malate synthase, glyoxisomal.
   
 
 0.734
PIIN_01625
Isocitrate lyase.
   
 
 0.678
PIIN_02841
Isocitrate lyase.
   
 
 0.678
PIIN_01434
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
    
 0.640
PIIN_08508
Acetolactate synthase.
  
 
 0.640
PIIN_00060
Related to peroxisomal targeting signal receptor.
    
 0.635
PIIN_06964
Related to PEX5-peroxisomal targeting signal receptor.
    
 0.635
PIIN_03333
Related to UBI4-Ubiquitin.
    
  0.633
PIIN_04265
Related to UBI4-Ubiquitin.
    
  0.633
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.