STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_05815Uncharacterized protein. (584 aa)    
Predicted Functional Partners:
PIIN_09121
RECA_2 domain-containing protein.
   
 0.986
PIIN_03556
3'-5' exonuclease domain-containing protein.
   
 0.982
PIIN_06810
Uncharacterized protein.
   
 0.982
PIIN_06731
Uncharacterized protein.
   
 0.962
PIIN_03982
Related to RAD57 protein.
   
 0.923
PIIN_02425
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
   
 0.919
PIIN_02420
Related to DMC1-Meiosis-specific protein; Belongs to the RecA family.
   
 0.910
PIIN_01809
Uncharacterized protein.
    
 0.829
PIIN_04103
Related to probable RNA helicase MPH1.
   
 
 0.813
PIIN_07813
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 
 0.779
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.