STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_05931Uncharacterized protein. (235 aa)    
Predicted Functional Partners:
PIIN_04945
Signal peptidase subunit 3.
   
 0.995
PIIN_10461
Uncharacterized protein.
   
 0.995
PIIN_03555
Signal peptidase complex catalytic subunit SEC11.
   
 0.976
PIIN_06081
Signal peptidase complex catalytic subunit SEC11.
   
 0.976
PIIN_07716
Mitochondrial inner membrane protease subunit.
   
 0.879
PIIN_02663
Related to glucose-regulated protein 78 of hsp70 family; Belongs to the heat shock protein 70 family.
   
 
 0.699
PIIN_06126
Related to glucose-regulated protein 78 of hsp70 family; Belongs to the heat shock protein 70 family.
   
 
 0.699
PIIN_06330
Related to translocation protein sec62.
    
 
 0.669
PIIN_02223
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 0.652
PIIN_06319
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
   
 0.652
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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