STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06062Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (456 aa)    
Predicted Functional Partners:
PIIN_01326
Probable glutamate synthase (NADPH).
  
 0.990
PIIN_07188
Related to NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 0.930
PIIN_08449
Aspartate aminotransferase.
   
 0.929
PIIN_00620
Aspartate aminotransferase.
   
 0.927
PIIN_04697
Related to NAD-dependent deacetylase sirtuin type 4.
    
 0.921
PIIN_05415
NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.919
PIIN_00859
Glutamine synthetase.
  
 
 0.905
PIIN_04157
Probable nitrilase (NIT3).
   
 
 0.892
PIIN_00474
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 0.890
PIIN_01085
Citrate synthase; Belongs to the citrate synthase family.
   
 0.880
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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