STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06079Uncharacterized protein. (1846 aa)    
Predicted Functional Partners:
PIIN_02060
Related to vesicular transport-associated repeat protein Tb-291.
   
 0.884
PIIN_02643
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.876
PIIN_01908
Probable IPL1-ser/thr protein kinase; Belongs to the protein kinase superfamily.
   
 0.875
PIIN_10561
Probable IPL1-ser/thr protein kinase; Belongs to the protein kinase superfamily.
   
 0.875
PIIN_02915
Related to regulator Ustilago maydis 1 protein (Rum1).
   
 0.843
PIIN_10579
Uncharacterized protein.
    
 0.813
PIIN_04681
Probable ubiquitin/ribosomal protein S27a fusion protein.
   
 0.759
PIIN_05020
CIA30 domain-containing protein.
   
 0.759
PIIN_00754
Related to WD40-repeat protein (Notchless protein).
   
 0.741
PIIN_04656
Uncharacterized protein.
   
 0.741
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.