STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06088Probable carnitine acetyl transferase FacC. (257 aa)    
Predicted Functional Partners:
PIIN_00891
Related to CAT2-Carnitine O-acetyltransferase.
  
0.768
PIIN_00343
Probable multifunctional beta-oxidation protein.
   
 
 0.746
PIIN_04235
Related to acyl-coa dehydrogenase, long-chain specific.
   
 0.717
PIIN_09958
Related to acyl-coa dehydrogenase, long-chain specific.
   
 0.717
PIIN_08289
Probable carnitine O-acetyltransferase, mitochondrial.
  
0.690
PIIN_11494
Carn_acyltransf domain-containing protein.
  
 0.671
PIIN_05744
Probable PHO81-cyclin-dependent kinase inhibitor.
     
 0.651
PIIN_07801
Probable acyl-CoA dehydrogenase short-branched chain.
   
 0.641
PIIN_04758
Probable carnitine/acyl carnitine carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.633
PIIN_11157
Uncharacterized protein.
   
 0.633
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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