STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06081Signal peptidase complex catalytic subunit SEC11. (170 aa)    
Predicted Functional Partners:
PIIN_05931
Uncharacterized protein.
   
 0.976
PIIN_10461
Uncharacterized protein.
   
 0.969
PIIN_04945
Signal peptidase subunit 3.
   
 0.966
cyn1
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.940
PIIN_09087
DEP domain-containing protein.
    
 0.846
PIIN_07146
WD_REPEATS_REGION domain-containing protein.
    
 0.831
PIIN_06378
Related to nitrogen permease regulator.
    
 0.830
PIIN_06370
Uncharacterized protein.
    
 0.800
PIIN_06371
WD_REPEATS_REGION domain-containing protein.
    
 0.800
PIIN_01432
Related to KTI12-Elongator associated protein.
     
 0.676
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.