STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06150Related to ser/thr protein kinases. (1283 aa)    
Predicted Functional Partners:
PIIN_05342
AMPKBI domain-containing protein.
    
 0.932
PIIN_05068
Probable nuclear protein SNF4.
   
 0.844
PIIN_07509
C3H1-type domain-containing protein.
   
 0.844
PIIN_07510
Uncharacterized protein.
   
 0.844
PIIN_08840
Probable nuclear protein SNF4.
   
 0.844
PIIN_07531
Probable protein kinase PAK1.
  
 
0.822
PIIN_01866
AMPK1_CBM domain-containing protein.
    
 0.806
PIIN_08460
Related to KOG1-Subunit of TORC1, a rapamycin-sensitive complex involved in growth control.
    
 0.746
PIIN_09972
Related to APG1-essential for autophagocytosis; Belongs to the protein kinase superfamily.
  
 
0.734
PIIN_02575
Probable hymA protein.
    
 0.730
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.