STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06165Probable CBF1-centromere binding factor 1. (361 aa)    
Predicted Functional Partners:
PIIN_00217
Probable BMH1-14-3-3 protein epsilon; Belongs to the 14-3-3 family.
    
 0.745
PIIN_04212
Uncharacterized protein.
    
 0.663
PIIN_03030
Related to SIZ1-E3-like factor in the SUMO pathway.
    
 0.638
PIIN_00573
Probable ubiquitin--protein ligase hus5; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.634
PIIN_05529
WLM domain-containing protein.
    
  0.634
PIIN_04582
PAS domain-containing protein.
    
 0.630
PIIN_08559
BHLH domain-containing protein.
    
 0.630
PIIN_07181
Ubiquitin-like domain-containing protein.
    
  0.610
PIIN_07217
Uncharacterized protein.
    
  0.610
PIIN_07728
Related to SMT3 ubiquitin-like protein.
    
  0.610
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.