STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06315Zn(2)-C6 fungal-type domain-containing protein. (344 aa)    
Predicted Functional Partners:
PIIN_03350
Related to SFH1 subunit of the RSC complex.
    
 0.844
PIIN_04360
annotation not available
    
 0.836
PIIN_03398
Related to ACT1-actin; Belongs to the actin family.
    
 0.835
PIIN_06631
Related to SWI/SNF complex protein-Laccaria bicolor.
    
 0.835
PIIN_03089
Uncharacterized protein.
    
 0.793
PIIN_02574
Probable UAF30-subunit of RNA polymerase I transcription factor.
    
 0.785
PIIN_03294
Related to RSC complex protein-Laccaria bicolor.
    
 0.778
PIIN_08101
Related to RSC complex protein-Laccaria bicolor.
    
 0.778
PIIN_08949
C2 domain-containing protein.
    
  0.725
PIIN_06800
Related to SNP1-U1 small nuclear ribonucleoprotein.
    
  0.681
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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