STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06330Related to translocation protein sec62. (282 aa)    
Predicted Functional Partners:
PIIN_00852
Related to SEC63-ER protein-translocation complex subunit.
   
 0.993
PIIN_02588
Probable endoplasmic reticulum insertion protein SEC61.
   
 
 0.980
PIIN_02350
Uncharacterized protein.
    
 
 0.979
PIIN_06413
Related to SSS1-ER protein-translocase complex subunit.
    
 
 0.979
PIIN_03438
Related to SEC66-ER protein-translocation complex chain.
    
 
 0.979
PIIN_02223
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.959
PIIN_06136
Uncharacterized protein.
    
 
 0.930
PIIN_01321
Protein kinase domain-containing protein.
    
 
 0.883
PIIN_06399
Probable ATP dependent RNA helicase.
     
 0.879
PIIN_05931
Uncharacterized protein.
    
 
 0.669
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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