STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06468Uncharacterized protein. (121 aa)    
Predicted Functional Partners:
PIIN_03071
Prohibitin.
   
 0.924
PIIN_01827
Uncharacterized protein.
   
 
 0.898
PIIN_06017
Prohibitin.
   
 0.892
PIIN_03494
Related to mitochondrial ribosomal protein L2 of the large subunit.
   
 
 0.869
PIIN_04154
Related to MRPL10-mitochondrial ribosomal protein, large subunit.
   
   0.858
PIIN_11735
Related to MRP2-mitochondrial ribosomal protein, small subunit.
   
 
 0.855
PIIN_09819
Probable MRPL23-mitochondrial ribosomal protein, large subunit; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.844
PIIN_08186
Uncharacterized protein.
   
 
 0.839
PIIN_07365
Uncharacterized protein.
   
   0.834
PIIN_01766
Related to mitochondrial ribosomal protein YmL8; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.832
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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